Service

I. Analysis for genomic data

• Starting data type

1. 1. 1. Whole genomic (shotgun) sequence by 2nd or 3rd generation sequencing

      2. Transcriptome data, including RNA-Seq & ISO-Seq

• The analysis items

1. Detect the variation by a single sample against the reference genome

   • Single nucleotide polymorphism, SNP

   • Insertion and deletion, indel

   • Large fragment deletion

   • Large fragment insertion

2. Polymorphism detection among multiple samples

3. The variation of chromosome level, e.g. translocation, inversion, and duplication

4. De novo transcriptom assemble

5. Mining known orthologous genes.

6. Differential expression analysis

7. Evolutionary relationship of candidate genes

II. Teaching, training, and talking

1. Speech for bioinformatic or genomic related topics

2. Training for specific bioinformatic software

3. Training for analysis a specific protocol

4. A course from basic operating Linux to DNA/RNA data analysis

The way we served

1. Discuss the object of the collaborator's project or the part we might contribute.

2. Receive sequence data. Normally in the format of FASTQ or FASTA.

3. Later discuss by discussed progress.

4. Delivery progress report.

5. The collaborator’s name or facility would be named on the studio’s website or the page of the studio’s asocial media page if approved by the collaborator.

Charging

• The total payment is by case and might discuss before or in the initial stage.

• Not working at the site, the minimum is charged by the monthly salary of the NSC's post-doctor and per week.

• At the site, charge by 3-hour or a half-day.